Prediction of microRNA target sites and more

predict targetsPredict target sites between your custom microRNAs and transcripts.

browse targetsBrowse pre-computed targets for multiple species styored in our SeedBank database.

download softwareDownload the stand-alone version of seedVicious to run it locally in your computer.

aboutAccess information about the software, references, the author and our lab.

You can download the latest version of seedVicious from HERE

Alternativelly, you can download it using curl in UNIX:

curl -O "https://seedvicious.essex.ac.uk/seedVicious_v1.3_x64.tar.gz"

A User Guide is available HERE. Refer to it for full installation instructions. For a quick installation in the folder 'software' inside your home directory, type:

tar -xvf seedVicious_v1.3_x64.tar.gz
mv seedVicious_v1.3_x64 ~/software/
echo 'export PATH=$PATH:~/software/seedVicious_v1.3_x64' >> ~/.bashrc
source ~/.bashrc
seedViciousTest
seedVicious --help

If you use either the web-server or the stand-alone version, please, cite this paper:

• Marco A (2018) SeedVicious: analysis of microRNA target and near-target sites. PLOS ONE 13:e0195532.